Dude, that's awesome! Got a couple questions though...
Where have you hooked the power up to if you say you still need to rewire the switch / regulator board? I was planning on wiring it up to the battery contacts on the main board, which will preserve the use of the power switch and regulator board anyway.
You're gonna stick a USB port in the side? That makes sense - for mine I plan on using a USB to DMG cable like the ones Kitsch sells and wire that up instead of the USB port on the charge circuit.
How much runtime do you think you'll get out of the 1200mAh battery?
You know if you're planning on sticking the charge circuit in the battery compartment you could use a clear battery door so you can see the status LEDs through.
Nice work so far - looking forward to seeing where you take it!